STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ55629.1Phenylacetate-coenzyme A ligase. (410 aa)    
Predicted Functional Partners:
KMZ55627.1
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.848
KMZ55628.1
Indolepyruvate ferredoxin oxidoreductase, beta subunit.
 
    0.794
KMZ53460.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.780
KMZ53464.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.775
KMZ55630.1
1-(5-phosphoribosyl)-5- ((5'-phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase; Belongs to the HisA/HisF family.
       0.763
KMZ53465.1
ACT domain protein.
 
   0.762
KMZ53463.1
ACT domain protein.
 
   0.743
KMZ55827.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.642
KMZ52869.1
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.624
KMZ55352.1
Hypothetical protein.
   
 0.598
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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