STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ55413.1Stage V sporulation protein D (Sporulation-specific penicillin-binding protein). (612 aa)    
Predicted Functional Partners:
KMZ55418.1
Hypothetical protein.
 
 
 0.965
KMZ55417.1
Stage V sporulation protein E; Belongs to the SEDS family.
 
 0.949
KMZ55615.1
Penicillin-binding protein 1A (PBP1a).
 
 
 0.929
KMZ55407.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.927
KMZ54998.1
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 0.910
KMZ55412.1
Hypothetical protein.
 
     0.876
KMZ55002.1
Putative penicillin binding protein transpeptidase domain protein.
  
  
0.865
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.856
KMZ54903.1
Putative cell division protein; Belongs to the SEDS family.
 
 0.852
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.849
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.