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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene co-occurrence
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Score
KMZ55194.1Oxygen-independent coproporphyrinogen III oxidase 2 (Coproporphyrinogenase) (Coprogen oxidase). (489 aa)    
Predicted Functional Partners:
KMZ55195.1
histidine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.849
KMZ55486.1
Porphyrin biosynthesis protein HemD.
  
 
 0.836
aspS
aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.788
KMZ53428.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
0.776
argS
arginine--tRNA ligase.
   
    0.773
KMZ55193.1
Metallo-beta-lactamase family protein.
 
   
 0.727
KMZ53054.1
Hypothetical protein.
   
    0.693
KMZ52669.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.668
KMZ55197.1
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.646
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
  
 0.605
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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