Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ55229.1Hypothetical protein. (281 aa)    
Predicted Functional Partners:
KMZ55230.1
Bacitracin transport ATP-binding protein BcrA.
 
  0.912
KMZ52965.1
Putative ABC transporter ATP-binding protein.
 
 0.796
KMZ55431.1
Hypothetical protein.
  
     0.741
KMZ52970.1
Putative KWG.
  
     0.707
KMZ52701.1
Hypothetical protein.
  
     0.695
KMZ55824.1
Putative transporter.
 
  
 0.647
KMZ52654.1
Hypothetical protein.
  
     0.618
KMZ54799.1
Bacitracin transport ATP-binding protein BcrA.
 
  0.612
KMZ55095.1
DnaJ protein.
  
     0.590
KMZ55382.1
Hypothetical protein.
  
     0.584
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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