Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMZ55232.1Periplasmic sensor signal transduction histidine kinase. (437 aa)    
Predicted Functional Partners:
KMZ55233.1
DNA-binding response regulator DltR.
 
  0.968
KMZ54976.1
Diguanylate cyclaSe/phosphodiesterase with PAS/PAC sensor(s).
  
 0.946
KMZ55234.1
Putative LigA.
 
  
  0.897
KMZ54942.1
Putative hybrid sensory kinase.
  
 0.847
KMZ55237.1
Hypothetical protein.
 
     0.836
KMZ55238.1
Hypothetical protein.
 
     0.832
KMZ55734.1
PAS domain protein.
 
 
0.793
KMZ52634.1
Subtilin biosynthesis regulatory protein SpaR.
 
  0.774
KMZ55564.1
Response regulator DrrA.
 
  0.768
KMZ55572.1
DNA-binding response regulator.
 
 0.766
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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