Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52993.1 | KMZ53028.1 | HMPREF0980_02856 | HMPREF0980_02893 | Sensory box histidine kinase. | Putative response regulator receiver domain protein. | 0.963 |
KMZ52993.1 | KMZ53555.1 | HMPREF0980_02856 | HMPREF0980_02424 | Sensory box histidine kinase. | Sensory box sensor histidine kinase/response regulator. | 0.983 |
KMZ52993.1 | KMZ54049.1 | HMPREF0980_02856 | HMPREF0980_01894 | Sensory box histidine kinase. | Sensor histidine kinase. | 0.908 |
KMZ52993.1 | KMZ54587.1 | HMPREF0980_02856 | HMPREF0980_01441 | Sensory box histidine kinase. | Sensor histidine kinase. | 0.705 |
KMZ52993.1 | KMZ54942.1 | HMPREF0980_02856 | HMPREF0980_00938 | Sensory box histidine kinase. | Putative hybrid sensory kinase. | 0.992 |
KMZ52993.1 | KMZ54975.1 | HMPREF0980_02856 | HMPREF0980_00971 | Sensory box histidine kinase. | Sensory box histidine kinase/response regulator. | 0.983 |
KMZ52993.1 | KMZ55232.1 | HMPREF0980_02856 | HMPREF0980_00580 | Sensory box histidine kinase. | Periplasmic sensor signal transduction histidine kinase. | 0.680 |
KMZ52993.1 | KMZ55233.1 | HMPREF0980_02856 | HMPREF0980_00581 | Sensory box histidine kinase. | DNA-binding response regulator DltR. | 0.815 |
KMZ52993.1 | KMZ55573.1 | HMPREF0980_02856 | HMPREF0980_00271 | Sensory box histidine kinase. | Putative sensor histidine kinase ResE. | 0.708 |
KMZ52993.1 | KMZ55734.1 | HMPREF0980_02856 | HMPREF0980_00433 | Sensory box histidine kinase. | PAS domain protein. | 0.984 |
KMZ53028.1 | KMZ52993.1 | HMPREF0980_02893 | HMPREF0980_02856 | Putative response regulator receiver domain protein. | Sensory box histidine kinase. | 0.963 |
KMZ53028.1 | KMZ53555.1 | HMPREF0980_02893 | HMPREF0980_02424 | Putative response regulator receiver domain protein. | Sensory box sensor histidine kinase/response regulator. | 0.999 |
KMZ53028.1 | KMZ54049.1 | HMPREF0980_02893 | HMPREF0980_01894 | Putative response regulator receiver domain protein. | Sensor histidine kinase. | 0.964 |
KMZ53028.1 | KMZ54587.1 | HMPREF0980_02893 | HMPREF0980_01441 | Putative response regulator receiver domain protein. | Sensor histidine kinase. | 0.721 |
KMZ53028.1 | KMZ54942.1 | HMPREF0980_02893 | HMPREF0980_00938 | Putative response regulator receiver domain protein. | Putative hybrid sensory kinase. | 0.999 |
KMZ53028.1 | KMZ54975.1 | HMPREF0980_02893 | HMPREF0980_00971 | Putative response regulator receiver domain protein. | Sensory box histidine kinase/response regulator. | 0.999 |
KMZ53028.1 | KMZ55232.1 | HMPREF0980_02893 | HMPREF0980_00580 | Putative response regulator receiver domain protein. | Periplasmic sensor signal transduction histidine kinase. | 0.716 |
KMZ53028.1 | KMZ55233.1 | HMPREF0980_02893 | HMPREF0980_00581 | Putative response regulator receiver domain protein. | DNA-binding response regulator DltR. | 0.884 |
KMZ53028.1 | KMZ55573.1 | HMPREF0980_02893 | HMPREF0980_00271 | Putative response regulator receiver domain protein. | Putative sensor histidine kinase ResE. | 0.722 |
KMZ53028.1 | KMZ55734.1 | HMPREF0980_02893 | HMPREF0980_00433 | Putative response regulator receiver domain protein. | PAS domain protein. | 0.999 |
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