Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMZ55293.1 | KMZ55296.1 | HMPREF0980_00641 | HMPREF0980_00644 | Serine acetyltransferase. | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.872 |
| KMZ55293.1 | KMZ55297.1 | HMPREF0980_00641 | HMPREF0980_00645 | Serine acetyltransferase. | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | 0.845 |
| KMZ55293.1 | KMZ55652.1 | HMPREF0980_00641 | HMPREF0980_00350 | Serine acetyltransferase. | Putative tetracycline resistance protein TetP. | 0.447 |
| KMZ55293.1 | cysS | HMPREF0980_00641 | HMPREF0980_00642 | Serine acetyltransferase. | cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.998 |
| KMZ55293.1 | mrnC | HMPREF0980_00641 | HMPREF0980_00643 | Serine acetyltransferase. | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.911 |
| KMZ55296.1 | KMZ55293.1 | HMPREF0980_00644 | HMPREF0980_00641 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Serine acetyltransferase. | 0.872 |
| KMZ55296.1 | KMZ55297.1 | HMPREF0980_00644 | HMPREF0980_00645 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | 0.876 |
| KMZ55296.1 | KMZ55652.1 | HMPREF0980_00644 | HMPREF0980_00350 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Putative tetracycline resistance protein TetP. | 0.759 |
| KMZ55296.1 | cysS | HMPREF0980_00644 | HMPREF0980_00642 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.970 |
| KMZ55296.1 | mrnC | HMPREF0980_00644 | HMPREF0980_00643 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.978 |
| KMZ55296.1 | rplC | HMPREF0980_00644 | HMPREF0980_03060 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.908 |
| KMZ55296.1 | rplU | HMPREF0980_00644 | HMPREF0980_00954 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.912 |
| KMZ55296.1 | rpmA | HMPREF0980_00644 | HMPREF0980_00956 | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.565 |
| KMZ55297.1 | KMZ55293.1 | HMPREF0980_00645 | HMPREF0980_00641 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | Serine acetyltransferase. | 0.845 |
| KMZ55297.1 | KMZ55296.1 | HMPREF0980_00645 | HMPREF0980_00644 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.876 |
| KMZ55297.1 | cysS | HMPREF0980_00645 | HMPREF0980_00642 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.860 |
| KMZ55297.1 | mrnC | HMPREF0980_00645 | HMPREF0980_00643 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.924 |
| KMZ55652.1 | KMZ55293.1 | HMPREF0980_00350 | HMPREF0980_00641 | Putative tetracycline resistance protein TetP. | Serine acetyltransferase. | 0.447 |
| KMZ55652.1 | KMZ55296.1 | HMPREF0980_00350 | HMPREF0980_00644 | Putative tetracycline resistance protein TetP. | RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.759 |
| KMZ55652.1 | cysS | HMPREF0980_00350 | HMPREF0980_00642 | Putative tetracycline resistance protein TetP. | cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.857 |
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