STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ55315.1Putative lipoprotein. (239 aa)    
Predicted Functional Partners:
KMZ55314.1
Putative lipoprotein.
     0.993
KMZ55316.1
Putative GGDEF domain/EAL domain protein.
 
     0.943
KMZ55236.1
Sugar ABC transporter, permease protein.
  
 0.816
KMZ54784.1
Sugar ABC transporter, permease protein.
  
 0.816
KMZ54246.1
ABC transporter, permease protein.
  
 0.816
KMZ54181.1
Mannitol ABC transporter, permease protein.
  
 0.816
KMZ52929.1
ABC transporter, permease protein.
  
 0.816
KMZ52947.1
ABC transporter permease.
  
 0.816
KMZ54761.1
Spermidine/putrescine ABC transporter, ATP-binding protein.
  
 0.803
KMZ54554.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.803
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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