STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ55322.1Putative cytosine permease. (450 aa)    
Predicted Functional Partners:
KMZ55321.1
Hypothetical protein.
     0.924
KMZ55323.1
Putative hydantoin racemase.
 
     0.737
KMZ55320.1
Xaa-his dipeptidase.
       0.699
KMZ53656.1
Hypothetical protein.
 
     0.680
KMZ55319.1
Peptidase, M20/M25/M40 family.
 
     0.653
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.629
KMZ54881.1
Aspartate carbamoyltransferase, regulatory subunit.
   
    0.625
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
   
    0.531
KMZ55651.1
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
   
    0.514
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
   
    0.514
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.