STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ55331.1Bacterial microcompartments protein. (212 aa)    
Predicted Functional Partners:
KMZ55329.1
Ethanolamine utilization protein EutN.
 
 
 
 0.920
KMZ55330.1
Microcompartment protein.
 
 
 
 0.917
KMZ55327.1
Microcompartment protein.
 
 
 
 0.800
KMZ55328.1
Cysteine desulfurase.
 
     0.783
KMZ53621.1
Microcompartment protein.
 
 
 
 0.687
KMZ53620.1
Propanediol utilization protein PduA.
 
 
 
 0.675
KMZ53624.1
Carbon dioxide concentrating mechanism protein CcmL.
 
 
 
 0.641
KMZ53623.1
Carbon dioxide concentrating mechanism protein CcmL.
 
 
 
 0.628
KMZ53071.1
Hypothetical protein.
  
     0.608
KMZ53077.1
DNA sulfur modification protein DndE.
  
     0.593
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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