Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52385.1 | KMZ52669.1 | HMPREF0980_03589 | HMPREF0980_03239 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.985 |
KMZ52385.1 | KMZ54465.1 | HMPREF0980_03589 | HMPREF0980_01319 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Fumarate hydratase, beta subunit. | 0.962 |
KMZ52385.1 | KMZ54643.1 | HMPREF0980_03589 | HMPREF0980_01055 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.939 |
KMZ52385.1 | argH | HMPREF0980_03589 | HMPREF0980_00851 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Argininosuccinate lyase. | 0.930 |
KMZ52669.1 | KMZ52385.1 | HMPREF0980_03239 | HMPREF0980_03589 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.985 |
KMZ52669.1 | KMZ53220.1 | HMPREF0980_03239 | HMPREF0980_02660 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.958 |
KMZ52669.1 | KMZ54465.1 | HMPREF0980_03239 | HMPREF0980_01319 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Fumarate hydratase, beta subunit. | 0.856 |
KMZ52669.1 | KMZ54643.1 | HMPREF0980_03239 | HMPREF0980_01055 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.992 |
KMZ52669.1 | argH | HMPREF0980_03239 | HMPREF0980_00851 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Argininosuccinate lyase. | 0.929 |
KMZ53220.1 | KMZ52669.1 | HMPREF0980_02660 | HMPREF0980_03239 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.958 |
KMZ53220.1 | KMZ54643.1 | HMPREF0980_02660 | HMPREF0980_01055 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.920 |
KMZ53220.1 | argH | HMPREF0980_02660 | HMPREF0980_00851 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Argininosuccinate lyase. | 0.940 |
KMZ54465.1 | KMZ52385.1 | HMPREF0980_01319 | HMPREF0980_03589 | Fumarate hydratase, beta subunit. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.962 |
KMZ54465.1 | KMZ52669.1 | HMPREF0980_01319 | HMPREF0980_03239 | Fumarate hydratase, beta subunit. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.856 |
KMZ54465.1 | KMZ54643.1 | HMPREF0980_01319 | HMPREF0980_01055 | Fumarate hydratase, beta subunit. | Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | 0.740 |
KMZ54465.1 | argH | HMPREF0980_01319 | HMPREF0980_00851 | Fumarate hydratase, beta subunit. | Argininosuccinate lyase. | 0.928 |
KMZ54549.1 | argH | HMPREF0980_01403 | HMPREF0980_00851 | Orn/Lys/Arg decarboxylase family protein. | Argininosuccinate lyase. | 0.923 |
KMZ54643.1 | KMZ52385.1 | HMPREF0980_01055 | HMPREF0980_03589 | Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.939 |
KMZ54643.1 | KMZ52669.1 | HMPREF0980_01055 | HMPREF0980_03239 | Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.992 |
KMZ54643.1 | KMZ53220.1 | HMPREF0980_01055 | HMPREF0980_02660 | Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.920 |
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