STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ54724.1Amino acid permease. (454 aa)    
Predicted Functional Partners:
nadE
Glutamine-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.840
KMZ54787.1
Oligo-1,6-glucosidase.
  
 0.825
KMZ54781.1
Amylosucrase.
  
 0.820
KMZ54403.1
Hypothetical protein.
   
 0.796
KMZ52601.1
Cyclomaltodextrinase.
   
 0.796
KMZ52460.1
Neopullulanase 1 (Alpha-amylase I) (TVA I); Belongs to the glycosyl hydrolase 13 family.
   
 0.796
KMZ54877.1
Chorismate mutase/prephenate dehydratase.
   
 0.735
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
    
 0.594
KMZ53187.1
Catalase.
     
 0.578
KMZ54783.1
Putative sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
     
 0.577
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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