STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ54827.1ABC transporter, ATP-binding protein. (303 aa)    
Predicted Functional Partners:
KMZ54826.1
Putative membrane protein.
 
  0.976
KMZ54828.1
Hypothetical protein.
 
    0.950
KMZ54829.1
DNA-binding protein.
 
     0.929
KMZ53254.1
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein.
  
 
  0.700
KMZ52637.1
Hypothetical protein.
 
  0.673
KMZ53679.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  0.657
KMZ55531.1
ABC-2 type transporter superfamily.
  
 
 0.649
KMZ54824.1
Molecular chaperone, DnaJ family.
 
   0.643
KMZ54969.1
Hypothetical protein.
 
  0.630
KMZ52816.1
Amino acid ABC transporter, permease/substrate-binding protein.
   
 0.584
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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