Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KMZ54466.1Fumarate hydratase, alpha subunit. (280 aa)    
Predicted Functional Partners:
KMZ54465.1
Fumarate hydratase, beta subunit.
 0.999
KMZ54981.1
Putative fumarate reductase flavoprotein subunit.
  
 
 0.979
KMZ52385.1
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 
 0.944
KMZ55041.1
Putative carboxylase.
    
 0.872
argH
Argininosuccinate lyase.
    
  0.856
KMZ55040.1
Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
    
  0.851
KMZ55788.1
L-lactate/malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.846
KMZ52549.1
Putative malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.846
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.846
KMZ53439.1
Aspartate aminotransferase.
     
  0.844
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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