STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ54579.1Putative hydrolase; Belongs to the peptidase M20A family. (420 aa)    
Predicted Functional Partners:
KMZ54580.1
Hypothetical protein.
       0.780
KMZ52992.1
Peptidase C45, acyl-coenzyme A--6-aminopenicillanic acid acyl-transferase.
   
 
  0.626
KMZ55283.1
Phosphoribosylformylglycinamidine synthase.
    
  0.615
proC-3
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.603
KMZ55766.1
Mg chelatase-like protein.
  
   0.599
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.583
dapF-2
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.583
KMZ54581.1
Hypothetical protein.
       0.533
KMZ55319.1
Peptidase, M20/M25/M40 family.
 
  
 0.498
KMZ54835.1
Glutamate synthase domain protein; Belongs to the glutamate synthase family.
    
  0.490
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.