Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ54292.1 | KMZ54293.1 | HMPREF0980_01478 | HMPREF0980_01479 | CheR methyltransferase, SAM binding domain protein. | Purine-binding chemotaxis protein CheW. | 0.997 |
KMZ54292.1 | KMZ54294.1 | HMPREF0980_01478 | HMPREF0980_01480 | CheR methyltransferase, SAM binding domain protein. | Chemotaxis protein CheA. | 0.998 |
KMZ54292.1 | KMZ54299.1 | HMPREF0980_01478 | HMPREF0980_01485 | CheR methyltransferase, SAM binding domain protein. | Putative sensory transducer protein. | 0.981 |
KMZ54292.1 | KMZ54330.1 | HMPREF0980_01478 | HMPREF0980_01516 | CheR methyltransferase, SAM binding domain protein. | Chemotaxis protein CheV. | 0.987 |
KMZ54292.1 | KMZ54942.1 | HMPREF0980_01478 | HMPREF0980_00938 | CheR methyltransferase, SAM binding domain protein. | Putative hybrid sensory kinase. | 0.980 |
KMZ54292.1 | KMZ54975.1 | HMPREF0980_01478 | HMPREF0980_00971 | CheR methyltransferase, SAM binding domain protein. | Sensory box histidine kinase/response regulator. | 0.954 |
KMZ54292.1 | KMZ54976.1 | HMPREF0980_01478 | HMPREF0980_00972 | CheR methyltransferase, SAM binding domain protein. | Diguanylate cyclaSe/phosphodiesterase with PAS/PAC sensor(s). | 0.946 |
KMZ54292.1 | KMZ55734.1 | HMPREF0980_01478 | HMPREF0980_00433 | CheR methyltransferase, SAM binding domain protein. | PAS domain protein. | 0.954 |
KMZ54292.1 | cheB | HMPREF0980_01478 | HMPREF0980_01477 | CheR methyltransferase, SAM binding domain protein. | Chemotaxis response regulator protein-glutamate methylesterase 2; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
KMZ54292.1 | cheD | HMPREF0980_01478 | HMPREF0980_01515 | CheR methyltransferase, SAM binding domain protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.938 |
KMZ54293.1 | KMZ54292.1 | HMPREF0980_01479 | HMPREF0980_01478 | Purine-binding chemotaxis protein CheW. | CheR methyltransferase, SAM binding domain protein. | 0.997 |
KMZ54293.1 | KMZ54294.1 | HMPREF0980_01479 | HMPREF0980_01480 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheA. | 0.999 |
KMZ54293.1 | KMZ54299.1 | HMPREF0980_01479 | HMPREF0980_01485 | Purine-binding chemotaxis protein CheW. | Putative sensory transducer protein. | 0.994 |
KMZ54293.1 | KMZ54330.1 | HMPREF0980_01479 | HMPREF0980_01516 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheV. | 0.979 |
KMZ54293.1 | KMZ54942.1 | HMPREF0980_01479 | HMPREF0980_00938 | Purine-binding chemotaxis protein CheW. | Putative hybrid sensory kinase. | 0.992 |
KMZ54293.1 | KMZ54975.1 | HMPREF0980_01479 | HMPREF0980_00971 | Purine-binding chemotaxis protein CheW. | Sensory box histidine kinase/response regulator. | 0.975 |
KMZ54293.1 | KMZ54976.1 | HMPREF0980_01479 | HMPREF0980_00972 | Purine-binding chemotaxis protein CheW. | Diguanylate cyclaSe/phosphodiesterase with PAS/PAC sensor(s). | 0.949 |
KMZ54293.1 | KMZ55734.1 | HMPREF0980_01479 | HMPREF0980_00433 | Purine-binding chemotaxis protein CheW. | PAS domain protein. | 0.975 |
KMZ54293.1 | cheB | HMPREF0980_01479 | HMPREF0980_01477 | Purine-binding chemotaxis protein CheW. | Chemotaxis response regulator protein-glutamate methylesterase 2; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
KMZ54293.1 | cheD | HMPREF0980_01479 | HMPREF0980_01515 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.956 |
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