Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMZ54361.1Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (330 aa)    
Predicted Functional Partners:
KMZ54360.1
Galactoside ABC transporter, ATP-binding protein.
 
   0.877
KMZ54358.1
Periplasmic binding protein/LacI transcriptional regulator.
 
   0.856
KMZ54359.1
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.831
KMZ54143.1
Sugar-binding transcriptional regulator, LacI family.
  
   0.805
KMZ54451.1
Putative periplasmic carbohydrate-binding transport protein.
  
   0.802
KMZ53780.1
Sugar ABC transporter (sugar-binding protein).
  
   0.797
KMZ54110.1
Sugar-binding transcriptional regulator, LacI family.
  
   0.796
KMZ53538.1
Putative periplasmic binding proteins and sugar binding domain of the LacI family protein.
  
   0.784
KMZ53310.1
Putative rhizopine uptake ABC transporter periplasmic solute-binding protein.
  
   0.776
KMZ53299.1
Putative ribose ABC transporter, periplasmic D-ribose-binding protein.
  
   0.762
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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