STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ54434.1L-xylulose/3-keto-L-gulonate kinase (L-xylulokinase) (3-dehydro-L-gulonate kinase); Belongs to the FGGY kinase family. (502 aa)    
Predicted Functional Partners:
KMZ54433.1
Putative hexulose-6-phosphate isomerase.
 
 
  0.900
KMZ52916.1
Carbohydrate kinase.
  
     0.708
KMZ54435.1
Putative sorbitol dehydrogenase.
  
 
  0.703
KMZ55879.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.638
KMZ54431.1
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.632
KMZ55444.1
Putative RDD family protein.
  
  
 0.553
KMZ53443.1
Hypothetical protein.
  
    0.510
KMZ55123.1
Carbohydrate kinase, FGGY family.
  
  
 
0.475
KMZ55156.1
L-fuculose phosphate aldolase.
  
 
 0.462
KMZ52532.1
Putative kinase.
  
  
 
0.461
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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