Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KMZ54159.1Putative Cof family protein. (163 aa)    
Predicted Functional Partners:
KMZ54158.1
Sugar phosphatase SupH.
     0.989
KMZ54772.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
 
 
 0.641
KMZ53036.1
HAD hydrolase, IIB family.
 
 
  0.622
KMZ53824.1
Hypothetical protein.
  
 
 0.567
KMZ54160.1
Ribose 5-phosphate isomerase B.
       0.556
KMZ54161.1
Putative PHP domain protein.
       0.547
KMZ54783.1
Putative sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
 
  
  0.502
KMZ54948.1
HAD superfamily hydrolase.
    
 0.482
KMZ53786.1
HAD-superfamily hydrolase, subfamily IA.
    
 0.482
KMZ55620.1
Putative phosphatase.
    
 0.478
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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