STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ54064.1Replication initiator protein. (116 aa)    
Predicted Functional Partners:
KMZ54063.1
Hypothetical protein.
       0.791
KMZ52669.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.767
KMZ53992.1
TnpX site-specific recombinase.
  
     0.747
KMZ55682.1
Replicative DNA helicase.
 
    0.632
KMZ54065.1
Hypothetical protein.
 
     0.632
KMZ54062.1
TnpV.
 
     0.600
KMZ54042.1
TnpX site-specific recombinase.
  
     0.507
KMZ54069.1
Response regulator DrrA.
 
     0.492
KMZ54067.1
ABC transporter, permease/ATP-binding protein.
 
     0.474
KMZ54013.1
Phage protein.
  
     0.460
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.