Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53899.1Cell surface protein. (528 aa)    
Predicted Functional Partners:
KMZ52967.1
Putative serine/threonine protein kinase.
   
 
 0.578
KMZ52669.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 
 0.543
KMZ53349.1
Putative NlpC/P60 family protein.
  
 
 0.501
KMZ54648.1
Hypothetical protein.
    
 
 0.452
KMZ53900.1
TPR-domain containing protein.
    
 
 0.452
KMZ54591.1
Putative internalin A.
  
   0.435
KMZ55041.1
Putative carboxylase.
   
    0.421
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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