Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMZ53861.1 | KMZ53863.1 | HMPREF0980_02088 | HMPREF0980_02090 | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.949 |
| KMZ53861.1 | spoIIAB | HMPREF0980_02088 | HMPREF0980_02089 | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.999 |
| KMZ53863.1 | KMZ53861.1 | HMPREF0980_02090 | HMPREF0980_02088 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.949 |
| KMZ53863.1 | KMZ54260.1 | HMPREF0980_02090 | HMPREF0980_01640 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative transcriptional regulator, MerR family. | 0.912 |
| KMZ53863.1 | KMZ55047.1 | HMPREF0980_02090 | HMPREF0980_00725 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, MerR family. | 0.912 |
| KMZ53863.1 | KMZ55650.1 | HMPREF0980_02090 | HMPREF0980_00348 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator of the BltD operon. | 0.912 |
| KMZ53863.1 | KMZ55833.1 | HMPREF0980_02090 | HMPREF0980_00046 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative transcriptional regulator, MerR family. | 0.912 |
| KMZ53863.1 | rpoA | HMPREF0980_02090 | HMPREF0980_03089 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.938 |
| KMZ53863.1 | rpoB | HMPREF0980_02090 | HMPREF0980_01683 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.937 |
| KMZ53863.1 | rpoC | HMPREF0980_02090 | HMPREF0980_01684 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.929 |
| KMZ53863.1 | rpoZ | HMPREF0980_02090 | HMPREF0980_01268 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.925 |
| KMZ53863.1 | spoIIAB | HMPREF0980_02090 | HMPREF0980_02089 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.962 |
| KMZ54260.1 | KMZ53863.1 | HMPREF0980_01640 | HMPREF0980_02090 | Putative transcriptional regulator, MerR family. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.912 |
| KMZ54260.1 | rpoA | HMPREF0980_01640 | HMPREF0980_03089 | Putative transcriptional regulator, MerR family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.912 |
| KMZ54260.1 | rpoB | HMPREF0980_01640 | HMPREF0980_01683 | Putative transcriptional regulator, MerR family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.921 |
| KMZ54260.1 | rpoC | HMPREF0980_01640 | HMPREF0980_01684 | Putative transcriptional regulator, MerR family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.912 |
| KMZ54260.1 | rpoZ | HMPREF0980_01640 | HMPREF0980_01268 | Putative transcriptional regulator, MerR family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.912 |
| KMZ55047.1 | KMZ53863.1 | HMPREF0980_00725 | HMPREF0980_02090 | Transcriptional regulator, MerR family. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.912 |
| KMZ55047.1 | KMZ55650.1 | HMPREF0980_00725 | HMPREF0980_00348 | Transcriptional regulator, MerR family. | Transcriptional regulator of the BltD operon. | 0.662 |
| KMZ55047.1 | rpoA | HMPREF0980_00725 | HMPREF0980_03089 | Transcriptional regulator, MerR family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.912 |
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