STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53726.1Cobalt ABC transporter, ATP-binding protein. (250 aa)    
Predicted Functional Partners:
KMZ53725.1
Cobalt ABC transporter, permease protein CbiQ.
 
 0.993
KMZ53724.1
Putative cobalamin biosynthesis protein CbiM.
 
 0.992
ecfT
Cobalt transport family protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.951
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.931
KMZ55470.1
Cobalt ABC transporter, permease protein CbiQ.
 
 0.926
KMZ55809.1
BioY family protein.
 
 
 0.841
KMZ53658.1
Putative membrane protein.
   
 
 0.840
KMZ53727.1
Putative AIR carboxylase.
 
    0.838
KMZ53729.1
ATP-utilizing enzymes of the PP-loop family protein.
 
    0.831
KMZ54210.1
Putative cobalt transport protein.
  
 0.826
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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