Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52669.1 | KMZ53028.1 | HMPREF0980_03239 | HMPREF0980_02893 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Putative response regulator receiver domain protein. | 0.596 |
KMZ52669.1 | KMZ53695.1 | HMPREF0980_03239 | HMPREF0980_02226 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.986 |
KMZ52669.1 | KMZ53697.1 | HMPREF0980_03239 | HMPREF0980_02228 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | butyryl-CoA dehydrogenase. | 0.993 |
KMZ52669.1 | KMZ54942.1 | HMPREF0980_03239 | HMPREF0980_00938 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Putative hybrid sensory kinase. | 0.400 |
KMZ52669.1 | accD | HMPREF0980_03239 | HMPREF0980_02068 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.954 |
KMZ52900.1 | KMZ53028.1 | HMPREF0980_02762 | HMPREF0980_02893 | Sensory box sensor histidine kinase/response regulator. | Putative response regulator receiver domain protein. | 0.990 |
KMZ52900.1 | KMZ53555.1 | HMPREF0980_02762 | HMPREF0980_02424 | Sensory box sensor histidine kinase/response regulator. | Sensory box sensor histidine kinase/response regulator. | 0.992 |
KMZ52900.1 | KMZ53695.1 | HMPREF0980_02762 | HMPREF0980_02226 | Sensory box sensor histidine kinase/response regulator. | 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.980 |
KMZ52900.1 | KMZ54942.1 | HMPREF0980_02762 | HMPREF0980_00938 | Sensory box sensor histidine kinase/response regulator. | Putative hybrid sensory kinase. | 0.998 |
KMZ52900.1 | KMZ54975.1 | HMPREF0980_02762 | HMPREF0980_00971 | Sensory box sensor histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.991 |
KMZ52900.1 | KMZ55733.1 | HMPREF0980_02762 | HMPREF0980_00432 | Sensory box sensor histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.948 |
KMZ52900.1 | KMZ55734.1 | HMPREF0980_02762 | HMPREF0980_00433 | Sensory box sensor histidine kinase/response regulator. | PAS domain protein. | 0.993 |
KMZ53028.1 | KMZ52669.1 | HMPREF0980_02893 | HMPREF0980_03239 | Putative response regulator receiver domain protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.596 |
KMZ53028.1 | KMZ52900.1 | HMPREF0980_02893 | HMPREF0980_02762 | Putative response regulator receiver domain protein. | Sensory box sensor histidine kinase/response regulator. | 0.990 |
KMZ53028.1 | KMZ53555.1 | HMPREF0980_02893 | HMPREF0980_02424 | Putative response regulator receiver domain protein. | Sensory box sensor histidine kinase/response regulator. | 0.999 |
KMZ53028.1 | KMZ53695.1 | HMPREF0980_02893 | HMPREF0980_02226 | Putative response regulator receiver domain protein. | 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.984 |
KMZ53028.1 | KMZ53697.1 | HMPREF0980_02893 | HMPREF0980_02228 | Putative response regulator receiver domain protein. | butyryl-CoA dehydrogenase. | 0.570 |
KMZ53028.1 | KMZ54942.1 | HMPREF0980_02893 | HMPREF0980_00938 | Putative response regulator receiver domain protein. | Putative hybrid sensory kinase. | 0.999 |
KMZ53028.1 | KMZ54975.1 | HMPREF0980_02893 | HMPREF0980_00971 | Putative response regulator receiver domain protein. | Sensory box histidine kinase/response regulator. | 0.999 |
KMZ53028.1 | KMZ55733.1 | HMPREF0980_02893 | HMPREF0980_00432 | Putative response regulator receiver domain protein. | Sensory box histidine kinase/response regulator. | 0.990 |
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