STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53510.1MATE efflux family protein. (459 aa)    
Predicted Functional Partners:
KMZ53511.1
Transcriptional regulator.
 
    0.820
KMZ54047.1
Putative PAP2 family protein.
   
    0.450
KMZ52822.1
Ser/Thr and Tyr protein phosphatase (dual specificity).
   
    0.450
KMZ52552.1
Protein of phosphatidic acid phosphatase family, YNBD.
   
    0.450
KMZ54685.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.449
KMZ53768.1
Glyceraldehyde-3-phosphate dehydrogenase, type II.
   
    0.449
KMZ55222.1
Ribosomal protein S1.
   
    0.406
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
   
    0.406
KMZ54888.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Overlaps another CDS with the same product name.
   
    0.406
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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