Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53531.1Carboxylesterase. (305 aa)    
Predicted Functional Partners:
KMZ53532.1
Hypothetical protein.
 
 
  0.976
KMZ54843.1
Bile acid 7-alpha dehydratase (BA7 alpha dehydratase)(Bile acid-inducible operon protein E).
 
  0.940
KMZ55143.1
Putative [Fe] hydrogenase, HymC subunit.
    
 0.911
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.903
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.903
KMZ55508.1
Protein HymB.
    
  0.892
KMZ54766.1
Protein HymB.
    
  0.892
KMZ53175.1
Iron-sulfur cluster-binding protein, Rieske family.
 
 
 0.846
KMZ54845.1
Bile acid-coenzyme A ligase.
 
 0.794
KMZ52669.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
  0.770
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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