Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53540.1Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (311 aa)    
Predicted Functional Partners:
KMZ53538.1
Putative periplasmic binding proteins and sugar binding domain of the LacI family protein.
 
   0.893
KMZ53539.1
Ribose ABC transporter, ATP-binding protein.
 
  0.860
KMZ54143.1
Sugar-binding transcriptional regulator, LacI family.
 
  0.841
KMZ54110.1
Sugar-binding transcriptional regulator, LacI family.
 
  0.837
KMZ53780.1
Sugar ABC transporter (sugar-binding protein).
  
   0.817
KMZ53310.1
Putative rhizopine uptake ABC transporter periplasmic solute-binding protein.
  
   0.815
KMZ54451.1
Putative periplasmic carbohydrate-binding transport protein.
  
   0.808
KMZ53936.1
Ribose ABC transporter, ribose-binding protein.
 
  0.807
KMZ53299.1
Putative ribose ABC transporter, periplasmic D-ribose-binding protein.
  
   0.790
KMZ52978.1
Putative D-ribose-binding protein.
  
   0.790
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
Server load: low (18%) [HD]