STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53542.1TIM-barrel signal transduction protein. (259 aa)    
Predicted Functional Partners:
KMZ53544.1
Transcriptional regulator.
  
 0.980
KMZ53545.1
Transcriptional regulator.
  
 0.971
KMZ53541.1
TIM-barrel signal transduction protein.
 
    
0.826
KMZ53543.1
Transcriptional regulator.
 
    
0.783
KMZ53540.1
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.707
KMZ53532.1
Hypothetical protein.
  
    0.658
KMZ53539.1
Ribose ABC transporter, ATP-binding protein.
       0.643
KMZ54872.1
Putative Rhs family protein.
   
    0.509
KMZ53538.1
Putative periplasmic binding proteins and sugar binding domain of the LacI family protein.
       0.435
KMZ53016.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.