Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53576.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
KMZ53575.1
Hypothetical protein.
 
     0.955
KMZ53578.1
Hypothetical protein.
 
     0.875
KMZ53860.1
Hypothetical protein.
 
     0.782
KMZ54491.1
Hypothetical protein.
  
     0.774
KMZ52442.1
Hypothetical protein.
  
     0.774
KMZ55412.1
Hypothetical protein.
  
     0.773
KMZ54906.1
Hypothetical protein.
  
     0.773
KMZ54993.1
Hypothetical protein.
  
     0.773
KMZ54535.1
Hypothetical protein.
  
     0.773
KMZ53055.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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