Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53595.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
KMZ53594.1
Hypothetical protein.
 
  
 0.966
KMZ53596.1
Putative tail lysozyme.
 
  
 0.939
KMZ53587.1
Conserved hypothetical phage tail region protein.
 
  
 0.925
KMZ53588.1
Putative secreted protein.
 
     0.924
KMZ53597.1
Hypothetical protein.
 
   
 0.924
KMZ53598.1
Hypothetical protein.
 
   
 0.923
KMZ52999.1
Putative integrase core domain protein.
  
  0.920
KMZ53599.1
Hypothetical protein.
 
     0.918
KMZ53602.1
Hypothetical protein.
 
   
 0.906
KMZ53586.1
Phage tail sheath protein.
 
   
 0.904
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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