Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53600.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
KMZ53601.1
ATPase, AAA family.
 
     0.944
KMZ53599.1
Hypothetical protein.
 
     0.937
KMZ53602.1
Hypothetical protein.
 
     0.935
KMZ53597.1
Hypothetical protein.
 
     0.934
KMZ53598.1
Hypothetical protein.
 
     0.934
KMZ53596.1
Putative tail lysozyme.
 
     0.931
KMZ53603.1
Hypothetical protein.
 
     0.911
KMZ53595.1
Hypothetical protein.
 
     0.901
KMZ53594.1
Hypothetical protein.
 
     0.897
KMZ53588.1
Putative secreted protein.
 
     0.884
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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