Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
KMZ53605.1Transcriptional repressor DeoR. (324 aa)    
Predicted Functional Partners:
KMZ55510.1
Glycerol dehydrogenase.
 
  
  0.544
KMZ53604.1
Hypothetical protein.
       0.497
KMZ55080.1
AI2 transporter.
  
    0.471
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+ ]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.455
KMZ55081.1
Putative aldolase.
 
  
 0.432
KMZ53603.1
Hypothetical protein.
       0.430
KMZ53606.1
Periplasmic binding protein/LacI transcriptional regulator.
  
    0.423
KMZ55075.1
Carbohydrate kinase, FGGY family.
 
     0.413
KMZ53611.1
Sugar kinase, putative xylulose kinase; Belongs to the FGGY kinase family.
 
     0.404
KMZ53612.1
Carbohydrate kinase.
 
     0.403
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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