Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52491.1 | KMZ53347.1 | HMPREF0980_03430 | HMPREF0980_02590 | Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Putative secreted protein. | 0.825 |
KMZ52491.1 | KMZ53348.1 | HMPREF0980_03430 | HMPREF0980_02591 | Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Putative cell wall-associated hydrolase. | 0.570 |
KMZ52491.1 | ftsE | HMPREF0980_03430 | HMPREF0980_03429 | Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.993 |
KMZ53028.1 | KMZ53347.1 | HMPREF0980_02893 | HMPREF0980_02590 | Putative response regulator receiver domain protein. | Putative secreted protein. | 0.752 |
KMZ53028.1 | KMZ53555.1 | HMPREF0980_02893 | HMPREF0980_02424 | Putative response regulator receiver domain protein. | Sensory box sensor histidine kinase/response regulator. | 0.999 |
KMZ53028.1 | KMZ54330.1 | HMPREF0980_02893 | HMPREF0980_01516 | Putative response regulator receiver domain protein. | Chemotaxis protein CheV. | 0.998 |
KMZ53028.1 | KMZ54942.1 | HMPREF0980_02893 | HMPREF0980_00938 | Putative response regulator receiver domain protein. | Putative hybrid sensory kinase. | 0.999 |
KMZ53028.1 | KMZ54975.1 | HMPREF0980_02893 | HMPREF0980_00971 | Putative response regulator receiver domain protein. | Sensory box histidine kinase/response regulator. | 0.999 |
KMZ53028.1 | KMZ55431.1 | HMPREF0980_02893 | HMPREF0980_00128 | Putative response regulator receiver domain protein. | Hypothetical protein. | 0.419 |
KMZ53028.1 | KMZ55734.1 | HMPREF0980_02893 | HMPREF0980_00433 | Putative response regulator receiver domain protein. | PAS domain protein. | 0.999 |
KMZ53347.1 | KMZ52491.1 | HMPREF0980_02590 | HMPREF0980_03430 | Putative secreted protein. | Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.825 |
KMZ53347.1 | KMZ53028.1 | HMPREF0980_02590 | HMPREF0980_02893 | Putative secreted protein. | Putative response regulator receiver domain protein. | 0.752 |
KMZ53347.1 | KMZ53348.1 | HMPREF0980_02590 | HMPREF0980_02591 | Putative secreted protein. | Putative cell wall-associated hydrolase. | 0.867 |
KMZ53347.1 | KMZ53555.1 | HMPREF0980_02590 | HMPREF0980_02424 | Putative secreted protein. | Sensory box sensor histidine kinase/response regulator. | 0.796 |
KMZ53347.1 | KMZ54330.1 | HMPREF0980_02590 | HMPREF0980_01516 | Putative secreted protein. | Chemotaxis protein CheV. | 0.808 |
KMZ53347.1 | KMZ54942.1 | HMPREF0980_02590 | HMPREF0980_00938 | Putative secreted protein. | Putative hybrid sensory kinase. | 0.808 |
KMZ53347.1 | KMZ54975.1 | HMPREF0980_02590 | HMPREF0980_00971 | Putative secreted protein. | Sensory box histidine kinase/response regulator. | 0.796 |
KMZ53347.1 | KMZ55431.1 | HMPREF0980_02590 | HMPREF0980_00128 | Putative secreted protein. | Hypothetical protein. | 0.938 |
KMZ53347.1 | KMZ55734.1 | HMPREF0980_02590 | HMPREF0980_00433 | Putative secreted protein. | PAS domain protein. | 0.796 |
KMZ53347.1 | ftsE | HMPREF0980_02590 | HMPREF0980_03429 | Putative secreted protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.762 |
page 1 of 3