Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ53003.1 | KMZ53193.1 | HMPREF0980_02866 | HMPREF0980_02724 | Toxin-antitoxin system, antitoxin component, Xre family. | Transporter, major facilitator family. | 0.568 |
KMZ53189.1 | KMZ53190.1 | HMPREF0980_02720 | HMPREF0980_02721 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative IolI protein. | 0.830 |
KMZ53189.1 | KMZ53191.1 | HMPREF0980_02720 | HMPREF0980_02722 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | NADH oxidase. | 0.599 |
KMZ53189.1 | KMZ53193.1 | HMPREF0980_02720 | HMPREF0980_02724 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transporter, major facilitator family. | 0.788 |
KMZ53189.1 | KMZ55376.1 | HMPREF0980_02720 | HMPREF0980_00477 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | NADH:flavin oxidoreductase. | 0.509 |
KMZ53189.1 | aroE | HMPREF0980_02720 | HMPREF0980_02723 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.715 |
KMZ53190.1 | KMZ53189.1 | HMPREF0980_02721 | HMPREF0980_02720 | Putative IolI protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.830 |
KMZ53190.1 | KMZ53191.1 | HMPREF0980_02721 | HMPREF0980_02722 | Putative IolI protein. | NADH oxidase. | 0.736 |
KMZ53190.1 | KMZ53193.1 | HMPREF0980_02721 | HMPREF0980_02724 | Putative IolI protein. | Transporter, major facilitator family. | 0.838 |
KMZ53190.1 | aroE | HMPREF0980_02721 | HMPREF0980_02723 | Putative IolI protein. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.868 |
KMZ53191.1 | KMZ53189.1 | HMPREF0980_02722 | HMPREF0980_02720 | NADH oxidase. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.599 |
KMZ53191.1 | KMZ53190.1 | HMPREF0980_02722 | HMPREF0980_02721 | NADH oxidase. | Putative IolI protein. | 0.736 |
KMZ53191.1 | KMZ53193.1 | HMPREF0980_02722 | HMPREF0980_02724 | NADH oxidase. | Transporter, major facilitator family. | 0.694 |
KMZ53191.1 | KMZ53194.1 | HMPREF0980_02722 | HMPREF0980_02725 | NADH oxidase. | Putative membrane protein. | 0.509 |
KMZ53191.1 | KMZ55376.1 | HMPREF0980_02722 | HMPREF0980_00477 | NADH oxidase. | NADH:flavin oxidoreductase. | 0.632 |
KMZ53191.1 | aroE | HMPREF0980_02722 | HMPREF0980_02723 | NADH oxidase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.768 |
KMZ53193.1 | KMZ53003.1 | HMPREF0980_02724 | HMPREF0980_02866 | Transporter, major facilitator family. | Toxin-antitoxin system, antitoxin component, Xre family. | 0.568 |
KMZ53193.1 | KMZ53189.1 | HMPREF0980_02724 | HMPREF0980_02720 | Transporter, major facilitator family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.788 |
KMZ53193.1 | KMZ53190.1 | HMPREF0980_02724 | HMPREF0980_02721 | Transporter, major facilitator family. | Putative IolI protein. | 0.838 |
KMZ53193.1 | KMZ53191.1 | HMPREF0980_02724 | HMPREF0980_02722 | Transporter, major facilitator family. | NADH oxidase. | 0.694 |
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