Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMZ52385.1 | KMZ52669.1 | HMPREF0980_03589 | HMPREF0980_03239 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.985 |
| KMZ52385.1 | KMZ52891.1 | HMPREF0980_03589 | HMPREF0980_02753 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Succinate-semialdehyde dehydrogenase [NAD(P)+]. | 0.690 |
| KMZ52385.1 | KMZ52892.1 | HMPREF0980_03589 | HMPREF0980_02754 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | succinyl-CoA synthase, beta subunit. | 0.995 |
| KMZ52385.1 | KMZ53175.1 | HMPREF0980_03589 | HMPREF0980_02738 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Iron-sulfur cluster-binding protein, Rieske family. | 0.869 |
| KMZ52385.1 | KMZ54082.1 | HMPREF0980_03589 | HMPREF0980_01927 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase. | 0.976 |
| KMZ52385.1 | KMZ54813.1 | HMPREF0980_03589 | HMPREF0980_01225 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Protein FdrA. | 0.871 |
| KMZ52385.1 | KMZ54981.1 | HMPREF0980_03589 | HMPREF0980_00977 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Putative fumarate reductase flavoprotein subunit. | 0.959 |
| KMZ52385.1 | KMZ55143.1 | HMPREF0980_03589 | HMPREF0980_00822 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Putative [Fe] hydrogenase, HymC subunit. | 0.799 |
| KMZ52385.1 | accD | HMPREF0980_03589 | HMPREF0980_02068 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.948 |
| KMZ52385.1 | sucD | HMPREF0980_03589 | HMPREF0980_02755 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.887 |
| KMZ52669.1 | KMZ52385.1 | HMPREF0980_03239 | HMPREF0980_03589 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.985 |
| KMZ52669.1 | KMZ52891.1 | HMPREF0980_03239 | HMPREF0980_02753 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Succinate-semialdehyde dehydrogenase [NAD(P)+]. | 0.968 |
| KMZ52669.1 | KMZ52892.1 | HMPREF0980_03239 | HMPREF0980_02754 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | succinyl-CoA synthase, beta subunit. | 0.993 |
| KMZ52669.1 | KMZ53175.1 | HMPREF0980_03239 | HMPREF0980_02738 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Iron-sulfur cluster-binding protein, Rieske family. | 0.984 |
| KMZ52669.1 | KMZ54082.1 | HMPREF0980_03239 | HMPREF0980_01927 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase. | 0.985 |
| KMZ52669.1 | KMZ54813.1 | HMPREF0980_03239 | HMPREF0980_01225 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Protein FdrA. | 0.994 |
| KMZ52669.1 | KMZ54981.1 | HMPREF0980_03239 | HMPREF0980_00977 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Putative fumarate reductase flavoprotein subunit. | 0.999 |
| KMZ52669.1 | KMZ55143.1 | HMPREF0980_03239 | HMPREF0980_00822 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Putative [Fe] hydrogenase, HymC subunit. | 0.999 |
| KMZ52669.1 | accD | HMPREF0980_03239 | HMPREF0980_02068 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.954 |
| KMZ52669.1 | sucD | HMPREF0980_03239 | HMPREF0980_02755 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.994 |
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