STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53084.1Putative replication initiation factor family protein. (336 aa)    
Predicted Functional Partners:
KMZ53085.1
Hypothetical protein.
 
     0.939
KMZ53086.1
Transposase; Belongs to the 'phage' integrase family.
 
   
 0.898
KMZ53083.1
Toxin-antitoxin system, antitoxin component, Xre family.
  
   
 0.777
KMZ54021.1
Putative TraE protein.
  
  
 0.743
KMZ55518.1
Hypothetical protein.
   
  
 0.609
KMZ52734.1
Hypothetical protein.
  
     0.590
KMZ54023.1
Hypothetical protein.
  
  
 0.576
KMZ53459.1
Hypothetical protein.
  
     0.566
KMZ55857.1
Putative NimC/NimA family protein.
  
     0.547
KMZ53082.1
Hypothetical protein.
  
     0.546
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.