Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52576.1 | KMZ53108.1 | HMPREF0980_03296 | HMPREF0980_02973 | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Hypothetical protein. | 0.937 |
KMZ52576.1 | KMZ55106.1 | HMPREF0980_03296 | HMPREF0980_00784 | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.920 |
KMZ52576.1 | rpoA | HMPREF0980_03296 | HMPREF0980_03089 | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.426 |
KMZ53108.1 | KMZ52576.1 | HMPREF0980_02973 | HMPREF0980_03296 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.937 |
KMZ53108.1 | KMZ55106.1 | HMPREF0980_02973 | HMPREF0980_00784 | Hypothetical protein. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.941 |
KMZ53108.1 | KMZ55280.1 | HMPREF0980_02973 | HMPREF0980_00628 | Hypothetical protein. | Putative helicase. | 0.932 |
KMZ53108.1 | KMZ55422.1 | HMPREF0980_02973 | HMPREF0980_00523 | Hypothetical protein. | Metallo-beta-lactamase family protein. | 0.991 |
KMZ53108.1 | KMZ55456.1 | HMPREF0980_02973 | HMPREF0980_00153 | Hypothetical protein. | Putative alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS). | 0.865 |
KMZ53108.1 | gpmI | HMPREF0980_02973 | HMPREF0980_01094 | Hypothetical protein. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.984 |
KMZ53108.1 | prfA | HMPREF0980_02973 | HMPREF0980_02304 | Hypothetical protein. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.917 |
KMZ53108.1 | rpoA | HMPREF0980_02973 | HMPREF0980_03089 | Hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.946 |
KMZ53108.1 | rpoB | HMPREF0980_02973 | HMPREF0980_01683 | Hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.943 |
KMZ53108.1 | rpoZ | HMPREF0980_02973 | HMPREF0980_01268 | Hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.935 |
KMZ55106.1 | KMZ52576.1 | HMPREF0980_00784 | HMPREF0980_03296 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.920 |
KMZ55106.1 | KMZ53108.1 | HMPREF0980_00784 | HMPREF0980_02973 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Hypothetical protein. | 0.941 |
KMZ55106.1 | rpoB | HMPREF0980_00784 | HMPREF0980_01683 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.416 |
KMZ55280.1 | KMZ53108.1 | HMPREF0980_00628 | HMPREF0980_02973 | Putative helicase. | Hypothetical protein. | 0.932 |
KMZ55280.1 | rpoA | HMPREF0980_00628 | HMPREF0980_03089 | Putative helicase. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
KMZ55280.1 | rpoB | HMPREF0980_00628 | HMPREF0980_01683 | Putative helicase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
KMZ55280.1 | rpoZ | HMPREF0980_00628 | HMPREF0980_01268 | Putative helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.993 |
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