STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53136.1ABC transporter, ATP-binding protein. (257 aa)    
Predicted Functional Partners:
KMZ53137.1
Putative antimicrobial peptide ABC transporter permease.
 
 0.983
KMZ54983.1
Efflux ABC transporter, permease protein.
 
 0.977
KMZ55567.1
Efflux ABC transporter, permease protein.
  
 0.972
KMZ54619.1
Efflux ABC transporter, permease protein.
  
 0.972
KMZ53569.1
ABC transporter, ATP-binding protein.
  
 0.972
KMZ53357.1
Efflux ABC transporter, permease protein.
  
 0.972
KMZ53139.1
Sensor histidine kinase.
 
   
 0.921
KMZ53340.1
Macrolide export ATP-binding/permease protein MacB.
 
  0.881
KMZ53138.1
DNA-binding response regulator.
 
     0.825
KMZ53209.1
Putative ABC transporter, permease protein.
 
 0.780
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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