STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ53156.1Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
KMZ53155.1
Selenocysteine-specific translation elongation factor.
 
   
 0.896
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.842
KMZ53243.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.699
KMZ53153.1
Selenide, water dikinase.
 
     0.648
KMZ53158.1
Putative membrane protein.
 
     0.613
KMZ53157.1
Cysteine desulfurase family protein.
       0.486
KMZ53152.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
     0.435
KMZ53159.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
     0.419
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
Server load: low (34%) [HD]