STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52868.1Putative ornithine cyclodeaminase. (345 aa)    
Predicted Functional Partners:
KMZ53162.1
Proline racemase A (TcPRACA) (TcPA45-A)(rTcPA45); Belongs to the proline racemase family.
 
  
 0.838
KMZ54638.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.761
KMZ52790.1
Arginase; Belongs to the arginase family.
  
 
 0.758
KMZ52742.1
Putative 1-aminocyclopropane-1-carboxylate synthase (ACCsynthase) (S-adenosyl-L-methionine methylthioadenosine-lyase).
 
  
 0.751
KMZ54695.1
Aspartate transaminase.
    
 0.715
KMZ52689.1
Alanine dehydrogenase.
    
  0.694
KMZ52513.1
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
    
  0.694
KMZ54677.1
Protein TabA.
  
 
 0.621
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 
 0.591
proC-2
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 
 0.591
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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