Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52772.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
KMZ52771.1
Acetyltransferase, GNAT family.
 
     0.747
KMZ52773.1
Putative Na+-driven multidrug efflux pump.
       0.661
KMZ52770.1
Hypothetical protein.
       0.610
KMZ55394.1
Serine protease DO.
  
    0.529
KMZ52996.1
Putative serine protease HtrA.
  
    0.529
KMZ52769.1
Methyltransferase domain protein.
       0.489
KMZ53220.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
 
    0.417
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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