STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52776.1Hypothetical protein. (557 aa)    
Predicted Functional Partners:
KMZ52332.1
Putative prophage Lp1 protein 52, endolysin.
 
 
 0.907
KMZ52333.1
Hypothetical protein.
  
   0.886
KMZ52337.1
Phage major tail protein, TP901-1 family.
   
   0.787
KMZ54387.1
Putative lipase/acylhydrolase.
 
 0.756
KMZ52793.1
Licheninase; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.706
KMZ55272.1
Hypothetical protein.
    
 0.683
KMZ54931.1
Hypothetical protein.
     
 0.676
KMZ55889.1
Hypothetical protein.
  
 0.641
KMZ54831.1
Lipase/acylhydrolase, GDSL family.
  
 0.641
KMZ54213.1
Arylesterase.
  
 0.641
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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