Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52385.1 | KMZ52669.1 | HMPREF0980_03589 | HMPREF0980_03239 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.985 |
KMZ52385.1 | KMZ52703.1 | HMPREF0980_03589 | HMPREF0980_03228 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | NAD-dependent malic enzyme. | 0.811 |
KMZ52385.1 | KMZ53626.1 | HMPREF0980_03589 | HMPREF0980_02495 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Phosphate acetyltransferase. | 0.699 |
KMZ52385.1 | KMZ54465.1 | HMPREF0980_03589 | HMPREF0980_01319 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Fumarate hydratase, beta subunit. | 0.962 |
KMZ52385.1 | KMZ54466.1 | HMPREF0980_03589 | HMPREF0980_01320 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Fumarate hydratase, alpha subunit. | 0.965 |
KMZ52385.1 | KMZ54664.1 | HMPREF0980_03589 | HMPREF0980_01076 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Phosphate acetyltransferase. | 0.699 |
KMZ52385.1 | KMZ54766.1 | HMPREF0980_03589 | HMPREF0980_01178 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Protein HymB. | 0.904 |
KMZ52669.1 | KMZ52385.1 | HMPREF0980_03239 | HMPREF0980_03589 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.985 |
KMZ52669.1 | KMZ52690.1 | HMPREF0980_03239 | HMPREF0980_03260 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.987 |
KMZ52669.1 | KMZ52703.1 | HMPREF0980_03239 | HMPREF0980_03228 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | NAD-dependent malic enzyme. | 0.979 |
KMZ52669.1 | KMZ53626.1 | HMPREF0980_03239 | HMPREF0980_02495 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Phosphate acetyltransferase. | 0.988 |
KMZ52669.1 | KMZ54465.1 | HMPREF0980_03239 | HMPREF0980_01319 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Fumarate hydratase, beta subunit. | 0.856 |
KMZ52669.1 | KMZ54466.1 | HMPREF0980_03239 | HMPREF0980_01320 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Fumarate hydratase, alpha subunit. | 0.858 |
KMZ52669.1 | KMZ54664.1 | HMPREF0980_03239 | HMPREF0980_01076 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Phosphate acetyltransferase. | 0.988 |
KMZ52669.1 | KMZ54679.1 | HMPREF0980_03239 | HMPREF0980_01091 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.991 |
KMZ52669.1 | KMZ54766.1 | HMPREF0980_03239 | HMPREF0980_01178 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Protein HymB. | 0.998 |
KMZ52669.1 | KMZ55842.1 | HMPREF0980_03239 | HMPREF0980_00055 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate, water dikinase. | 0.988 |
KMZ52690.1 | KMZ52669.1 | HMPREF0980_03260 | HMPREF0980_03239 | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.987 |
KMZ52690.1 | KMZ52703.1 | HMPREF0980_03260 | HMPREF0980_03228 | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | NAD-dependent malic enzyme. | 0.786 |
KMZ52690.1 | KMZ54679.1 | HMPREF0980_03260 | HMPREF0980_01091 | Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.923 |
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