STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52611.1ABC transporter, ATP-binding protein. (282 aa)    
Predicted Functional Partners:
KMZ52610.1
Transcriptional regulator, GntR family.
 
    0.960
KMZ52612.1
Hypothetical protein.
 
   
 0.955
KMZ53254.1
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein.
  
 
  0.700
KMZ55531.1
ABC-2 type transporter superfamily.
  
 
 0.640
KMZ54969.1
Hypothetical protein.
 
  0.630
KMZ53679.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
  0.598
KMZ55389.1
Transcriptional regulator, GntR family.
 
    0.592
KMZ52637.1
Hypothetical protein.
  
  0.588
KMZ52816.1
Amino acid ABC transporter, permease/substrate-binding protein.
    
 0.584
KMZ55229.1
Hypothetical protein.
  
  0.582
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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