Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
KMZ52475.1Transcriptional regulator, ArsR family. (119 aa)    
Predicted Functional Partners:
KMZ52476.1
Cadmium-exporting ATPase.
 
  
 0.952
KMZ52474.1
Cadmium-exporting ATPase.
 
  
 0.895
KMZ55396.1
Copper-exporting ATPase.
 
  
 0.744
KMZ55695.1
Heavy metal translocating P-type ATPase.
 
  
 0.705
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.668
KMZ52477.1
Putative tetratricopeptide TPR_2.
       0.663
birA
biotin-[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.469
KMZ55397.1
Hypothetical protein.
 
   
 0.460
KMZ54694.1
Pyrophosphatase, MutT/nudix family.
    
  0.428
KMZ55692.1
Copper-exporting ATPase.
  
  
 0.427
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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