Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52457.1Putative response regulator. (241 aa)    
Predicted Functional Partners:
KMZ52456.1
Hypothetical protein.
  
 0.916
KMZ53556.1
Two-component sensor histidine kinase.
 
 0.908
KMZ53183.1
Regulatory protein LytS.
 
 0.906
KMZ53766.1
Histidine kinase internal region.
 
 0.905
KMZ54166.1
Putative sensor histidine kinase.
 
 0.901
KMZ54127.1
Two-component sensor kinase YesM.
 
 
  0.799
KMZ54106.1
Sensor histidine kinase.
 
 
  0.798
KMZ54137.1
Putative sensor histidine kinase.
 
 
  0.798
KMZ53063.1
Putative HAMP domain protein.
 
 
  0.794
KMZ52953.1
Putative two-component sensor histidine kinase YesM.
 
 
  0.793
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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