STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52466.1Spore cortex protein YabQ. (117 aa)    
Predicted Functional Partners:
KMZ52467.1
Sporulation protein YabP.
 
  
 0.968
KMZ52468.1
S4 RNA-binding domain protein.
  
    0.827
KMZ52471.1
Spore coat protein, CotS family.
 
     0.801
KMZ52465.1
Putative cell division protein FtsL.
 
    0.785
KMZ54403.1
Hypothetical protein.
  
     0.772
KMZ55020.1
Hypothetical protein.
  
     0.769
KMZ52464.1
Putative serine phosphatase RsbU, regulator of sigma subunit.
 
     0.754
KMZ52811.1
Hypothetical protein.
  
     0.745
KMZ52443.1
Putative LysM domain protein.
  
     0.738
KMZ53043.1
Putative LysM domain protein.
  
     0.733
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.