Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52471.1Spore coat protein, CotS family. (363 aa)    
Predicted Functional Partners:
KMZ52466.1
Spore cortex protein YabQ.
 
     0.801
KMZ53043.1
Putative LysM domain protein.
 
     0.778
KMZ52443.1
Putative LysM domain protein.
 
     0.774
KMZ54384.1
Putative immediate-early protein.
  
 
   0.759
KMZ52811.1
Hypothetical protein.
  
     0.759
KMZ53042.1
Hypothetical protein.
 
     0.757
KMZ55426.1
Hypothetical protein.
  
     0.756
KMZ55024.1
Putative stage IV sporulation protein.
  
     0.755
KMZ54403.1
Hypothetical protein.
  
    0.755
KMZ53697.1
butyryl-CoA dehydrogenase.
  
 0.755
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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