Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52318.1 | KMZ53347.1 | HMPREF0980_03520 | HMPREF0980_02590 | Chitinase, class I. | Putative secreted protein. | 0.698 |
KMZ52318.1 | KMZ55096.1 | HMPREF0980_03520 | HMPREF0980_00774 | Chitinase, class I. | Intracellular alkaline serine protease. | 0.554 |
KMZ52318.1 | KMZ55243.1 | HMPREF0980_03520 | HMPREF0980_00591 | Chitinase, class I. | Putative secreted protein. | 0.554 |
KMZ52318.1 | KMZ55454.1 | HMPREF0980_03520 | HMPREF0980_00151 | Chitinase, class I. | Collagen protein. | 0.554 |
KMZ52318.1 | KMZ55515.1 | HMPREF0980_03520 | HMPREF0980_00212 | Chitinase, class I. | GMP synthase, C- domain protein. | 0.777 |
KMZ52318.1 | KMZ55661.1 | HMPREF0980_03520 | HMPREF0980_00359 | Chitinase, class I. | Hypothetical protein. | 0.554 |
KMZ52318.1 | KMZ55785.1 | HMPREF0980_03520 | HMPREF0980_00081 | Chitinase, class I. | Putative prophage LambdaSa04, minor structural protein. | 0.554 |
KMZ52318.1 | cinA | HMPREF0980_03520 | HMPREF0980_01265 | Chitinase, class I. | Competence/damage-inducible protein CinA; Belongs to the CinA family. | 0.805 |
KMZ52318.1 | guaA | HMPREF0980_03520 | HMPREF0980_02932 | Chitinase, class I. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.777 |
KMZ52318.1 | guaB | HMPREF0980_03520 | HMPREF0980_00473 | Chitinase, class I. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.760 |
KMZ53347.1 | KMZ52318.1 | HMPREF0980_02590 | HMPREF0980_03520 | Putative secreted protein. | Chitinase, class I. | 0.698 |
KMZ55096.1 | KMZ52318.1 | HMPREF0980_00774 | HMPREF0980_03520 | Intracellular alkaline serine protease. | Chitinase, class I. | 0.554 |
KMZ55243.1 | KMZ52318.1 | HMPREF0980_00591 | HMPREF0980_03520 | Putative secreted protein. | Chitinase, class I. | 0.554 |
KMZ55454.1 | KMZ52318.1 | HMPREF0980_00151 | HMPREF0980_03520 | Collagen protein. | Chitinase, class I. | 0.554 |
KMZ55515.1 | KMZ52318.1 | HMPREF0980_00212 | HMPREF0980_03520 | GMP synthase, C- domain protein. | Chitinase, class I. | 0.777 |
KMZ55515.1 | cinA | HMPREF0980_00212 | HMPREF0980_01265 | GMP synthase, C- domain protein. | Competence/damage-inducible protein CinA; Belongs to the CinA family. | 0.465 |
KMZ55515.1 | guaA | HMPREF0980_00212 | HMPREF0980_02932 | GMP synthase, C- domain protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.939 |
KMZ55515.1 | guaB | HMPREF0980_00212 | HMPREF0980_00473 | GMP synthase, C- domain protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
KMZ55661.1 | KMZ52318.1 | HMPREF0980_00359 | HMPREF0980_03520 | Hypothetical protein. | Chitinase, class I. | 0.554 |
KMZ55785.1 | KMZ52318.1 | HMPREF0980_00081 | HMPREF0980_03520 | Putative prophage LambdaSa04, minor structural protein. | Chitinase, class I. | 0.554 |
page 1 of 2