STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMZ52318.1Chitinase, class I. (325 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
   
 
 0.805
KMZ55515.1
GMP synthase, C- domain protein.
    
 0.777
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.777
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.760
KMZ53347.1
Putative secreted protein.
  
  
 0.698
KMZ55785.1
Putative prophage LambdaSa04, minor structural protein.
    
 0.554
KMZ55454.1
Collagen protein.
    
 0.554
KMZ55661.1
Hypothetical protein.
    
 0.554
KMZ55243.1
Putative secreted protein.
    
 0.554
KMZ55096.1
Intracellular alkaline serine protease.
    
 0.554
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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