STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD54581.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
SDE67107.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
    
 0.954
SDG38943.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
    
 0.954
SDE23174.1
Hypothetical protein.
  
 
 0.702
SDF99908.1
Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
    
 0.664
SDG73625.1
Hypothetical protein; Belongs to the UPF0753 family.
  
    0.650
SDE10890.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region.
  
     0.630
SDF40512.1
SusD family protein.
  
     0.595
SDE06344.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.570
SDE86706.1
Starch-binding associating with outer membrane.
  
     0.551
SDF49677.1
Lysophospholipase L1.
  
     0.550
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.